Insertion junction: CLIP2.065735_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065735
Chromosome:chromosome 8
Location:3790289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTAGAAATGCTCTTCTTTGCCGTCAGGTGCTCGTAGCTAAGCAGTGGG
Internal bar code:GGCAGAGGGTACCGAGGCGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:949
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCATCAGGCCTCATCCT
Suggested primer 2:ATCTAGCCCGCATCAGAAGC