Insertion junction: CLIP2.065735_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065735
Chromosome:chromosome 8
Location:3790297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTAGGGCTGTTCGCAACCTCTCTCGATTTCCACCGCATGCGCATGAAA
Internal bar code:GGCAGAGGGTACCGAGGCGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4842
LEAP-Seq percent confirming:57.5221
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTAGCCCGCATCAGAAGC
Suggested primer 2:ACCTCATCAGGCCTCATCCT