Insertion junction: CLIP2.065744_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065744
Chromosome:chromosome 7
Location:215219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313500 NUP214 Nucleoporin 214 3'UTR_intron
Cre07.g313550 (1 of 1) PTHR15495//PTHR15495:SF17 - NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGATCATGCATGCTGGGCCTCGATTCGCTGGTTAGGATGGAGCTGCAG
Internal bar code:TGCCTTTTGCGGTTGGGTGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1457
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGATCAGTCGGTGGTGTG
Suggested primer 2:CAAACACACACGCACGCATA