Insertion junction: CLIP2.065754_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065754
Chromosome:chromosome 9
Location:3543679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396512 OPR12 OctotricoPeptide Repeat protein 12 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTCGCCGGGTGCAAGAGTGGCACCCCTGAGTTCTTTATGATTGGCG
Internal bar code:TGCCATTTAGATACACCGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:608
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGGGATGGGCTGCTATG
Suggested primer 2:CGGACTGTCCCGTCTTTGAA