Insertion junction: CLIP2.065773_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065773
Chromosome:chromosome 16
Location:6668663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673400 Chlamydomonas-specific family W protein; (1 of 6) PF06701 - Mib_herc2 (MIB_HERC2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCGCCGTGAAGACGAGACACTAGTTCACGCCTATTCACCGGCCAGTA
Internal bar code:CCAATTGCTTTTCTGAGTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2608
LEAP-Seq percent confirming:96.0784
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACACGTGCGCTTCCTAA
Suggested primer 2:CGACCAAGCCTGATCCAAGT