Insertion junction: CLIP2.065778_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065778
Chromosome:chromosome 12
Location:3366790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498250 RPS17 Cytosolic 80S ribosomal protein S17; (1 of 1) K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAACCGCATGAATGCGGATGTTACAGAGGTGACAGTCCCAGCACCCGA
Internal bar code:GAAATCTTCCGTCTAGATAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2376
LEAP-Seq percent confirming:96.2264
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGACATCTTGGCGGGTA
Suggested primer 2:TACGCTTGGGCTTCTTCCAG