Insertion junction: CLIP2.065789_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065789
Chromosome:chromosome 16
Location:678453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTAGTCCGTTCCTTGTCAGGCCCTGTCAGGCAGCCTGCTGCCTTTTT
Internal bar code:AAGCGAGCGGTGTCGAATATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2804
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTCCCTACATTGCTGT
Suggested primer 2:TCGGAAAAGTCCTCTGTGGC