Insertion junction: CLIP2.065796_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065796
Chromosome:chromosome 2
Location:314501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075100 TPR3 (1 of 1) PTHR22904//PTHR22904:SF356 - TPR REPEAT CONTAINING PROTEIN // TETRATRICOPEPTIDE REPEAT PROTEIN 1; Tetratricopeptide-repeat protein 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGTTCAGTCCTGGCGACCGCGACATTTAGCGTTTCGACTTCGGCTC
Internal bar code:GAAAGATCGAGTATATATAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3781
LEAP-Seq percent confirming:98.8636
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCACCATGGCCCCAGAG
Suggested primer 2:GCCACTCCCTGTTTTTGCTG