Insertion junction: CLIP2.065796_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065796
Chromosome:chromosome 2
Location:314502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075100 TPR3 (1 of 1) PTHR22904//PTHR22904:SF356 - TPR REPEAT CONTAINING PROTEIN // TETRATRICOPEPTIDE REPEAT PROTEIN 1; Tetratricopeptide-repeat protein 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCCGACGCTGTCAGGATTTACTCTATGGATGAATCTAAGTTGGCGG
Internal bar code:GAAAGATCGAGTATATATAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1863
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACTCCCTGTTTTTGCTG
Suggested primer 2:AAATCACCATGGCCCCAGAG