Insertion junction: CLIP2.065814_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065814
Chromosome:chromosome 13
Location:4196431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591501 PUS2 (1 of 2) PTHR11142:SF0 - TRNA PSEUDOURIDINE SYNTHASE-LIKE 1; RNA pseudouridine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACTTCATGATTCGCCCGCCAACCCGCTCCAAGCCCGCACAGTGCATT
Internal bar code:CTGTGTAAACTTGGAATTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2508
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACAAAACGGCAGCATGG
Suggested primer 2:AGGAGCATTGCTTGGCTGAT