Insertion junction: CLIP2.065815_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065815
Chromosome:chromosome 8
Location:709971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360550 ERM3,NIRK,NIRK1 Copper-containing nitrite reductase, mitochondrial; (1 of 1) 1.7.2.1 - Nitrite reductase (NO-forming) / Pseudomonas cytochrome oxidase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGGCGGATGTGCTCGCTGCGGCGACTGATGGCAATGACAGAAATTTG
Internal bar code:CTGACGGTCCTGGTGCTCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:522
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCTACTGAACGCCTGGG
Suggested primer 2:CAAGGGCCCTGTTGGTTTTG