Insertion junction: CLIP2.065817_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065817
Chromosome:chromosome 13
Location:2902218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583400 OPR57 OctotricoPeptide Repeat protein 57; (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAAGCCCAACGCTGCATCAAAGGTATCCTACATACGAACATTTATTG
Internal bar code:AACCATGATGGCCGACGATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGACGCTAATGCTGGAT
Suggested primer 2:CTGGTATGCACCTCCGATCC