Insertion junction: CLIP2.065826_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065826
Chromosome:chromosome 12
Location:178060
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g484600 DMC6 Putative DNA methylase; (1 of 1) 2.1.1.204 - tRNA (cytosine(38)-C(5))-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGGCCCATGCTTGCTCGGCGCCTGCAGCGATGTCGCCAACTCCCCCA
Internal bar code:ATAGAGGTAGCGCAGTCGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTCAAAACTCGCGTGCC
Suggested primer 2:GCTGTCACTCTTCCTGCAGT