Insertion junction: CLIP2.065829_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065829
Chromosome:chromosome 5
Location:1155396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248500 TRXO,TRXO1,TRX15 Thioredoxin o, mitochondrial; (1 of 1) PTHR10438//PTHR10438:SF275 - THIOREDOXIN // THIOREDOXIN O1, MITOCHONDRIAL-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCCCGCGTCTCCACCCGACCCCACCCCTGCCTAAGCCTTGAATTCCA
Internal bar code:GTGATGGCAGCAAGGGGACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACTACAAGGGCGGACGA
Suggested primer 2:TCTCCTCCTCCATCCACCAG