Insertion junction: CLIP2.065836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065836
Chromosome:chromosome 16
Location:7382888
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g680117 (1 of 1) K15692 - E3 ubiquitin-protein ligase RNF13 [EC:6.3.2.19] (RNF13, RZF) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAACTGTACCCGGCATTCTACTGTAACGAGTTAACACGTAGGTAATGG
Internal bar code:ATCGGCGTCCCTGATGGTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1949
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTACACGTTTGCAGGC
Suggested primer 2:TGGTTTTGGGACTGCACTGT