Insertion junction: CLIP2.065839_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065839
Chromosome:chromosome 11
Location:3591652
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGAAAGCTTCGTAAAGGGTGTGGCCAGGGTGTGTGTGTGTCACGTGTT
Internal bar code:CTGGTCTTGCGCTGAGGGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1441
LEAP-Seq percent confirming:93.0233
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCTTGAACTTTCGGCC
Suggested primer 2:AGCTAAAACGAGTGTGGGGG