Insertion junction: CLIP2.065842_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065842
Chromosome:chromosome 1
Location:6122382
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043500 (1 of 1) PTHR20882//PTHR20882:SF14 - FAMILY NOT NAMED // CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTGATGCTGCAGGATCGGGAGAGCAAATGCCACTCATGGGGCAGGAG
Internal bar code:TAGCAGGGTTTATTGTAGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4242
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGCGTTGGAATTGGTG
Suggested primer 2:GCCGTTTTGCACTTGTAGCA