Insertion junction: CLIP2.065853_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065853
Chromosome:chromosome 15
Location:719041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637350 TRM3,TMG13 tRNA (guanosine-2'-O)-methyltransferase; (1 of 2) PTHR12029//PTHR12029:SF11 - RNA METHYLTRANSFERASE // METHYLTRANSFERASE TARBP1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATTTGTTTGTGGATGTTGGGGGTTTCGCGGAACTCGCGGGTCAAGTG
Internal bar code:CCACCCGCCTTCCCAGCCTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1196
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGACCTCAACTAACACA
Suggested primer 2:CGTCACACACACACACACAC