Insertion junction: CLIP2.065853_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065853
Chromosome:chromosome 15
Location:719045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g637350 TRM3,TMG13 tRNA (guanosine-2'-O)-methyltransferase; (1 of 2) PTHR12029//PTHR12029:SF11 - RNA METHYLTRANSFERASE // METHYLTRANSFERASE TARBP1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTAATCATGACGCCGACGCTGCATCCGCACAAGACACACACACACACA
Internal bar code:TAAGGCGTCTTTTTAAAAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2064
LEAP-Seq percent confirming:83.1933
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCACACACACACACACAC
Suggested primer 2:GCCCGACCTCAACTAACACA