Insertion junction: CLIP2.065855_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065855
Chromosome:chromosome 9
Location:3643778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397031 (1 of 6) 5.3.99.5 - Thromboxane-A synthase / Thromboxane synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTGAATGGCGAAAACGTTGGCAACTGGACAGGCGTGCGAGTGGTCG
Internal bar code:GTTTTCTCAATGGCGGGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5563
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:128

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCCCATCCTCCCCTATT
Suggested primer 2:ACAATCGCAGATGGCCAAGA