Insertion junction: CLIP2.065865_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065865
Chromosome:chromosome 12
Location:5235424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527500 (1 of 1) K04508 - transducin (beta)-like 1 (TBL1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTAGTCGAGGCTCTGCCCTGCCCAGACCTGAGGAACACACTTCCATC
Internal bar code:CAGTATGGAATATCTAACTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2285
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATATCCAACACGTGCGC
Suggested primer 2:CCTGAGCATGTGGGTGATGT