Insertion junction: CLIP2.065869_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065869
Chromosome:chromosome 1
Location:4154836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027700 3'UTR
Cre01.g027750 MAE7,MFT7 MATE efflux family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACTCAACTGTGATGGTGTTGGGCTGTATTTTTGCTCGTGACCGTGCC
Internal bar code:TGTCCAATGCCTTCAACGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGGCTTGAGGACTTGG
Suggested primer 2:TCGACCTGTACCTGGAGGAG