Insertion junction: CLIP2.065871_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065871
Chromosome:chromosome 1
Location:3549860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023100 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCTTGGTATGGATGACCGGGCGGGCTTGACAGAACCTGACATGCTTC
Internal bar code:ATTACAAGGAGCCGCAAAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2054
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCCGTGTTCACAAACAG
Suggested primer 2:GCTAACAGCGACGACTACGA