Insertion junction: CLIP2.065873_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065873
Chromosome:chromosome 16
Location:1141235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650050 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTTAACACCGATCACGCCTTTACAATTTTGATCACTTGTTGATGCCG
Internal bar code:TAGGGAATTATCGGGGTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:964
LEAP-Seq percent confirming:7.07965
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:105
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCAACGTGAATGCAACA
Suggested primer 2:TGTCGCACACTCACAGACTC