Insertion junction: CLIP2.065888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065888
Chromosome:chromosome 6
Location:5547835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287000 (1 of 1) PTHR31495//PTHR31495:SF0 - FAMILY NOT NAMED // PEROXYGENASE 1-RELATED 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGAAGGAGCGCCACTCGCTCTCCATTTACAAACCTGCTCTACACCA
Internal bar code:CGTCTTGATAGATCGATGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1318
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTGTGTGGGTATGTGC
Suggested primer 2:TCAGGAGCAGACCTTTGCAG