Insertion junction: CLIP2.065897_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065897
Chromosome:chromosome 5
Location:210727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242900 (1 of 1) K12592 - exosome complex protein LRP1 (C1D, LRP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTACCCCTGCAACACCGGCTCTGGCGGTCTGGCCCGGTGTTGCAACTG
Internal bar code:TGATCCAGCACGCGAAGTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4063
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGAATACGCCAGCAATG
Suggested primer 2:CGGCTGAGACTTGTGTCACT