Insertion junction: CLIP2.065899_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065899
Chromosome:chromosome 4
Location:2662861
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g223150 NCL1,CLR18,OPR20 (1 of 1) IPR008920 - Transcription regulator FadR/GntR, C-terminal; Nuclear Control of chloroplast Like 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCTCTGGGCGCTGGCGGTGCTGCAGCTGCGGCACGCCGGCTTGGAG
Internal bar code:TAACAGCAAAGTCGACATGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:497
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGGGCAGGAGATCCTTC
Suggested primer 2:CCCTTGCCCTGGACATGAAT