Insertion junction: CLIP2.065905_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065905
Chromosome:chromosome 16
Location:593562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692200 MMP6 (1 of 1) IPR003609//IPR008752 - PAN/Apple domain // Peptidase M11, gametolysin; Metalloproteinase of VMP family 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCGTGGAAGAATGGCCGGGCCACTTCCATGACACTTCATGTGCGCC
Internal bar code:GCCTTCTCATTTACCCGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4089
LEAP-Seq percent confirming:87.931
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGCGCAAACCAGCTAA
Suggested primer 2:ACATCACGGCTGCTATCGAG