Insertion junction: CLIP2.065908_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065908
Chromosome:chromosome 8
Location:4358945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384864 (1 of 1) PF00018//PF14604 - SH3 domain (SH3_1) // Variant SH3 domain (SH3_9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCGGCCCACTACTTGGTTCAGGTTACAGACGCGCTTGTTTGGGAGTT
Internal bar code:TGGGTCCAGAGGTTATCGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1925
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTTGCTGAGATGGAGGG
Suggested primer 2:CACAAGCACACGTGTCACAG