Insertion junction: CLIP2.065911_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065911
Chromosome:chromosome 8
Location:2488034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372400 UBC19 E2 Ubiquitin conjugating enzyme; (1 of 1) K04554 - ubiquitin-conjugating enzyme E2 J2 (UBE2J2, NCUBE2, UBC6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGCCCTATATATGGCTCTAGATCGCCTTCTATACCCATCGTAAGGCA
Internal bar code:GAGATCCACAATTGTGTCACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1993
LEAP-Seq percent confirming:73.913
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTGACTGCGAGTTTCC
Suggested primer 2:GCGAAATGACGATGGTGACG