Insertion junction: CLIP2.065916_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065916
Chromosome:plastome
Location:61358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802289 ChreCp025,rps14,2716974 (1 of 1) K02954 - small subunit ribosomal protein S14 (RP-S14, MRPS14, rpsN); 30S ribosomal protein S14 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAATATTTATATTCCCGTAAGGGGACGTCCTGCCAACTGCCTCTTTGAA
Internal bar code:CTGCGCCTTTCCGTGGGGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1906
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACCTGTGTCCAACCAA
Suggested primer 2:TAGCGCTTAGACGAGGACCT