Insertion junction: CLIP2.065929_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065929
Chromosome:chromosome 12
Location:7618890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555750 CPK7 (1 of 13) PTHR10584 - SUGAR KINASE; putative carbohydrate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGTAGTGGCTGATAGGCGGTAGGCCCATCCCCCCCGTCCGGTGACCG
Internal bar code:TAGTTTCCGATGTTGCACGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:32.4324
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACGAGTGTGAGGGCAAA
Suggested primer 2:AGGCCGCAAGAATGATTCCA