Insertion junction: CLIP2.065929_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065929
Chromosome:chromosome 12
Location:7618892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555750 CPK7 (1 of 13) PTHR10584 - SUGAR KINASE; putative carbohydrate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTGGCTACGGGTAACCCGGTCTGGCCCCGTCATGGCTATAGACTGGGG
Internal bar code:TAGTTTCCGATGTTGCACGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5029
LEAP-Seq percent confirming:96.7033
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCGCAAGAATGATTCCA
Suggested primer 2:GAGACGAGTGTGAGGGCAAA