Insertion junction: CLIP2.065933_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065933
Chromosome:chromosome 9
Location:715653
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g404350 XPO4 Exportin 4; (1 of 1) PTHR12596//PTHR12596:SF1 - EXPORTIN 4,7-RELATED // EXPORTIN-4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGGCCCTGATGTGCAGCGCGGCCTGGGTCATACCCGGCACGTCCCCC
Internal bar code:TAAGGTAGAATCTTTTAAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:205
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCATTGCCTGCTTAGGA
Suggested primer 2:GGGGTTGGTGGTTCAAGTCA