Insertion junction: CLIP2.065943_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065943
Chromosome:chromosome 3
Location:7500538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205500 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGTACTCGTCACGAACCCGCTCGAACTCCCCGCGGAAGCTGTGGCCGT
Internal bar code:GGTCCGCAATCATCCATTCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1981
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTGGTAGTCCCAACGCC
Suggested primer 2:CATTGCGTAATGGTGCGAGG