Insertion junction: CLIP2.065950_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065950
Chromosome:chromosome 17
Location:5306020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802111 (1 of 20) PF01822 - WSC domain (WSC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTTCGTAGTTGAGGGCCTCGTAATGTCCGAAGTGCAAGATTTGCTGC
Internal bar code:GACATAATCACTGCGACAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2262
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTGCATGCTGAGATGTC
Suggested primer 2:AGCCGCTAAGTTGCTGTTCT