Insertion junction: CLIP2.065955_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065955
Chromosome:chromosome 16
Location:2926431
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663500 RPN10 (1 of 1) K03029 - 26S proteasome regulatory subunit N10 (PSMD4, RPN10); 26S proteasome regulatory subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCATGGTGAAAAGCGAGCACACAGGCGGCTTACCCCCAGCACATTTA
Internal bar code:CGCTAGTTTGCTGAGGGGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1885
LEAP-Seq percent confirming:16.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACCTGGATGAAGACGC
Suggested primer 2:AGGGTCTGACGCTGTTGAAG