Insertion junction: CLIP2.065965_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065965
Chromosome:chromosome 16
Location:854985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g647750 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAAGATGTCTACGATCATTTCTATTGAGCAATTCAAGCAGCTTTTGG
Internal bar code:GGTGGGAGGTGTTATGAAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3626
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTATGTTTTGCCGACGC
Suggested primer 2:GTAGTCTGCGAGATTCGGGG