Insertion junction: CLIP2.065973_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065973
Chromosome:chromosome 14
Location:397984
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g610501 RAA14,SDR34 (1 of 2) IPR002347//IPR003560 - Glucose/ribitol dehydrogenase // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Short-chain dehydrogenase/reductase found in psaA trans-splicing complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATGTACTCTTCACCCCCTACACCCCTACACCTCCCGCCCACCTGCGA
Internal bar code:TCGGTCGCACGTTGTTAGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:346
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAATTCAAGGCCCGCGTATG
Suggested primer 2:GCAAGCCTGGCAATTGAACA