Insertion junction: CLIP2.065980_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065980
Chromosome:chromosome 12
Location:6134514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535350 (1 of 1) IPR011044//IPR017986 - Quinoprotein amine dehydrogenase, beta chain-like // WD40-repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCCTTCCGGAACGCTTCTGACACGCGTGCAAGCTCCTTGCCAAGTC
Internal bar code:GTTATTGGCGGGAGCCTTCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:281
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAGGAGGGCTTGTCTGC
Suggested primer 2:AACACATGTTGGGTTGGGGT