Insertion junction: CLIP2.065982_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065982
Chromosome:chromosome 16
Location:5233851
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684400 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCCGGCCCGCCACACCCAAAAACACACTGCTATCCCCAACCGGGGCC
Internal bar code:TTCGGAATGCTCGTGTTCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2861
LEAP-Seq percent confirming:42.2222
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCTGTGCGATTACCCCT
Suggested primer 2:GCAGCAAGGTTCCTTTCAGC