Insertion junction: CLIP2.065991_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065991
Chromosome:chromosome 3
Location:5763804
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g187450 RPI1 Ribose-5-phosphate isomerase, chloroplastic; (1 of 1) PTHR11934//PTHR11934:SF7 - RIBOSE-5-PHOSPHATE ISOMERASE // RIBOSE-5-PHOSPHATE ISOMERASE 1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGTCTGTGGGGGCGGGCGGGCTCCTGGTGGTGCATCTGCGCCTGTGC
Internal bar code:TGACATTGTTAATGAGAATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:855
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGACACACATAACCGAA
Suggested primer 2:TACGAGCAGGCTCTGTCTCT