Insertion junction: CLIP2.065996_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065996
Chromosome:chromosome 3
Location:6868290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197700 HLM8 (1 of 1) PTHR13793//PTHR13793:SF100 - PHD FINGER PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED; Histone-lysine N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACAATGACCTCCACAAAGCTCAATATTCCATACTGTATGTGTATGTA
Internal bar code:TAAAGCTCGGAGGGTGAGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2281
LEAP-Seq percent confirming:95.7747
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACCGCCTTGTCCTTGAG
Suggested primer 2:GAGCTGACGTACGACTACCG