Insertion junction: CLIP2.066002_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066002
Chromosome:chromosome 12
Location:5191541
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g527100 (1 of 1) IPR002048//IPR003439//IPR003593//IPR027417 - EF-hand domain // ABC transporter-like // AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACACAGGGCCACGCCGAGACAATGCTCTACCCGGCAAAAATGAGCTA
Internal bar code:CGGGTATTGGACTTCGCAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:494
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCAGCAATTGCCAGCAA
Suggested primer 2:AAACATCTCAGCAGGGCTCC