Insertion junction: CLIP2.066011_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066011
Chromosome:chromosome 14
Location:2489335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624201 (1 of 1) PTHR10438//PTHR10438:SF247 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCCTCGCCCCATGCACGCCCCGCATCCGCTGGCCGCTGCCGAGTGC
Internal bar code:TATCCACATTAGTAGTAAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCATGAATCGGCGTGACG
Suggested primer 2:TGCCAAGGGAGAACGACTTC