Insertion junction: CLIP2.066013_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066013
Chromosome:chromosome 6
Location:7438269
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g300550 TIC100 (1 of 14) PF02493 - MORN repeat (MORN); 100 kDa subunit of translocon at the inner membrane of chloroplasts intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACGTGGCCTTGGTGCTTGTGGTGGCGTTGGTGCCAATGGTGGTTCCG
Internal bar code:GCGTGTTACGCCAATCTGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:146
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGCTATGTGGAGGACGA
Suggested primer 2:CAACCAAACACAGCACCCTG