Insertion junction: CLIP2.066047_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066047
Chromosome:chromosome 17
Location:775003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g701300 (1 of 1) K17491 - protein phosphatase 4 regulatory subunit 3 (SMEK, PPP4R3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAGGGGAGTCGGCACTTGCCGAGGGCATATGCACACGCTCTTCCAGT
Internal bar code:GGAGGAACAATGTGGTCGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1173
LEAP-Seq percent confirming:92.9412
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TAACGGTCAACACGTCAGGG
Suggested primer 2:CATCATCACCATGCAGCAGC