Insertion junction: CLIP2.066048_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066048
Chromosome:chromosome 7
Location:1099409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320400 ELI4,ELIP4 Early light-induced LHC-like protein; (1 of 5) PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCCCACAGTCCGGCCTTGCACTCAGGAAGCTTATTGACAAGTGTTGC
Internal bar code:TCAGGGGAACATGGGCTAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1622
LEAP-Seq percent confirming:42.3077
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTACGCTGCAGTGCATCA
Suggested primer 2:TGCACTCTCTGAACGTGGAC