Insertion junction: CLIP2.066049_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066049
Chromosome:chromosome 13
Location:2702136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581700 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCGGCCACCCCCACCTGCGCGCTTACCCAGCTAACTTTCAACAGAT
Internal bar code:AAATTGTGTAAAGGTTTATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1468
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCTTGCGGTTGTCGACA
Suggested primer 2:AGCGGCATACAGATTACCGG