Insertion junction: CLIP2.066056_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066056
Chromosome:chromosome 17
Location:5912833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741850 HNR1 Heterogeneous nuclear ribonucleoprotein; (1 of 1) K12898 - heterogeneous nuclear ribonucleoprotein F/H (HNRNPF_H) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGTAGGGGACGTGAACCAGCACGGCCGCGTAGCCCCTTGCTACCATC
Internal bar code:AATAATTAGCCTCCGAGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1308
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTAGATCCGCGTGTGAGG
Suggested primer 2:CTGTCGTCCCGTCATAGCTC